Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 BNIP3P18-201ENST00000593976 575 ntBASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 AC148477.8-201ENST00000624298 468 ntBASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC42EP3Q9UKI2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDC42EP3Q9UKI2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDC42EP3Q9UKI2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CDC42EP3Q9UKI2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.96□□□□□ -0.02
CDC42EP3Q9UKI2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CDC42EP3Q9UKI2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC42EP3Q9UKI2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 RBM17P3-201ENST00000417687 1192 ntBASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 AC083906.6-201ENST00000641366 219 ntBASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 AC079781.4-201ENST00000641908 219 ntBASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC42EP3Q9UKI2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 AC006333.2-201ENST00000607957 2099 ntBASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 AL161938.1-201ENST00000569833 2180 ntBASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.94□□□□□ -0.02
CDC42EP3Q9UKI2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms