Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 BX323043.1-201ENST00000641006 1765 ntBASIC20.27■□□□□ 0.84
FBXO40Q9UH90 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 AC140113.2-201ENST00000604370 208 ntBASIC20.27■□□□□ 0.84
FBXO40Q9UH90 PGM5P2-202ENST00000637225 1043 ntBASIC20.27■□□□□ 0.84
FBXO40Q9UH90 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.27■□□□□ 0.83
FBXO40Q9UH90 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FBXO40Q9UH90 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.27■□□□□ 0.83
FBXO40Q9UH90 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.27■□□□□ 0.83
FBXO40Q9UH90 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.27■□□□□ 0.83
FBXO40Q9UH90 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
FBXO40Q9UH90 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
FBXO40Q9UH90 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
FBXO40Q9UH90 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 AP002414.3-201ENST00000589352 1468 ntBASIC20.26■□□□□ 0.83
FBXO40Q9UH90 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 PGAM5P1-201ENST00000518923 814 ntBASIC20.26■□□□□ 0.83
FBXO40Q9UH90 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 AC116407.2-201ENST00000613639 860 ntBASIC20.26■□□□□ 0.83
FBXO40Q9UH90 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 MIR1199-201ENST00000621445 119 ntBASIC20.26■□□□□ 0.83
FBXO40Q9UH90 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FBXO40Q9UH90 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 AL353593.2-201ENST00000602529 1483 ntBASIC20.25■□□□□ 0.83
FBXO40Q9UH90 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 AL096828.2-201ENST00000567259 1965 ntBASIC20.25■□□□□ 0.83
FBXO40Q9UH90 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 AL020989.1-201ENST00000422979 469 ntBASIC20.25■□□□□ 0.83
FBXO40Q9UH90 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 UNC93B6-202ENST00000528242 690 ntBASIC20.25■□□□□ 0.83
FBXO40Q9UH90 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO40Q9UH90 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 MIR1233-2-201ENST00000408138 82 ntBASIC20.24■□□□□ 0.83
FBXO40Q9UH90 MIR1233-1-201ENST00000408722 82 ntBASIC20.24■□□□□ 0.83
FBXO40Q9UH90 KRT18P27-201ENST00000427733 1299 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms