Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 AC090164.3-201ENST00000610780 2143 ntBASIC16.83■□□□□ 0.28
CTSFQ9UBX1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSFQ9UBX1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 INTS4P1-201ENST00000438455 1935 ntBASIC16.82■□□□□ 0.28
CTSFQ9UBX1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.82■□□□□ 0.28
CTSFQ9UBX1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSFQ9UBX1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 REXO1L9P-201ENST00000604264 2108 ntBASIC16.81■□□□□ 0.28
CTSFQ9UBX1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 TP73-AS1-207ENST00000624167 988 ntBASIC16.81■□□□□ 0.28
CTSFQ9UBX1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.81■□□□□ 0.28
CTSFQ9UBX1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms