Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 RN7SL510P-201ENST00000581311 263 ntBASIC17.96■□□□□ 0.47
DKK3Q9UBP4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.96■□□□□ 0.47
DKK3Q9UBP4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.96■□□□□ 0.47
DKK3Q9UBP4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
DKK3Q9UBP4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
DKK3Q9UBP4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
DKK3Q9UBP4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 AC004870.1-201ENST00000315132 882 ntBASIC17.95■□□□□ 0.46
DKK3Q9UBP4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 AL591684.3-201ENST00000605187 298 ntBASIC17.95■□□□□ 0.46
DKK3Q9UBP4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
DKK3Q9UBP4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 INTS4P1-201ENST00000438455 1935 ntBASIC17.94■□□□□ 0.46
DKK3Q9UBP4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DKK3Q9UBP4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.93■□□□□ 0.46
DKK3Q9UBP4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 FLJ13224-201ENST00000313737 1514 ntBASIC17.93■□□□□ 0.46
DKK3Q9UBP4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.93■□□□□ 0.46
DKK3Q9UBP4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms