Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 AC022898.2-201ENST00000616822 1312 ntBASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 RPS2P1-201ENST00000434010 821 ntBASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 RPL13AP23-201ENST00000480739 586 ntBASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 AC106730.1-201ENST00000566722 1090 ntBASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 AL139288.1-201ENST00000623748 933 ntBASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIT1Q9P2V4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 AC096633.1-201ENST00000422446 749 ntBASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 OR7E14P-202ENST00000530490 1290 ntBASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 NKAPP1-205ENST00000585790 367 ntBASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 AP000867.4-201ENST00000641616 219 ntBASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 AC020763.4-201ENST00000623414 4170 ntBASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRIT1Q9P2V4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 WIZP1-201ENST00000531444 2299 ntBASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 BCL2-203ENST00000589955 5011 ntBASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 KRT18P58-201ENST00000527480 1120 ntBASIC17.24■□□□□ 0.35
LRIT1Q9P2V4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms