Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NCKIPSDQ9NZQ3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 TSPY22P-201ENST00000427496 604 ntBASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 FAAHP1-202ENST00000446499 1238 ntBASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCKIPSDQ9NZQ3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 AC004870.1-201ENST00000315132 882 ntBASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 AC009065.1-201ENST00000564055 1225 ntBASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 AC079602.3-201ENST00000623931 403 ntBASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NCKIPSDQ9NZQ3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 MIR3180-1-201ENST00000580374 94 ntBASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 MIR3180-3-201ENST00000584616 94 ntBASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 AP002414.4-201ENST00000589764 1148 ntBASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 AC010240.3-201ENST00000607688 395 ntBASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 AC012313.10-201ENST00000623509 926 ntBASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 FLJ13224-201ENST00000313737 1514 ntBASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCKIPSDQ9NZQ3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms