Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.77■□□□□ 0.92
RNF216Q9NWF9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 CASKP1-201ENST00000412870 582 ntBASIC20.77■□□□□ 0.92
RNF216Q9NWF9 PCED1CP-201ENST00000419887 785 ntBASIC20.77■□□□□ 0.92
RNF216Q9NWF9 AC096638.2-201ENST00000434965 711 ntBASIC20.77■□□□□ 0.92
RNF216Q9NWF9 NOC2LP1-201ENST00000450578 752 ntBASIC20.77■□□□□ 0.92
RNF216Q9NWF9 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 MTCO3P28-201ENST00000513351 515 ntBASIC20.77■□□□□ 0.92
RNF216Q9NWF9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 AC105233.3-201ENST00000531125 744 ntBASIC20.77■□□□□ 0.92
RNF216Q9NWF9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
RNF216Q9NWF9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF216Q9NWF9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF216Q9NWF9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF216Q9NWF9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF216Q9NWF9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF216Q9NWF9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 IER3-202ENST00000376377 1350 ntBASIC20.76■□□□□ 0.91
RNF216Q9NWF9 MTND4P10-201ENST00000446199 1363 ntBASIC20.76■□□□□ 0.91
RNF216Q9NWF9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 TPTE2P3-201ENST00000441562 1189 ntBASIC20.76■□□□□ 0.91
RNF216Q9NWF9 AC009947.2-201ENST00000444014 672 ntBASIC20.76■□□□□ 0.91
RNF216Q9NWF9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 TVP23BP2-201ENST00000455082 615 ntBASIC20.76■□□□□ 0.91
RNF216Q9NWF9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 AC133528.1-201ENST00000608316 805 ntBASIC20.76■□□□□ 0.91
RNF216Q9NWF9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF216Q9NWF9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 MTND4P34-201ENST00000572715 1371 ntBASIC20.75■□□□□ 0.91
RNF216Q9NWF9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 OR13Z1P-201ENST00000416141 834 ntBASIC20.75■□□□□ 0.91
RNF216Q9NWF9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 SCAND3P1-201ENST00000439854 1060 ntBASIC20.75■□□□□ 0.91
RNF216Q9NWF9 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 FAM86EP-206ENST00000510506 987 ntBASIC20.75■□□□□ 0.91
RNF216Q9NWF9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 AL441883.1-201ENST00000566170 1045 ntBASIC20.75■□□□□ 0.91
RNF216Q9NWF9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 AL023973.1-201ENST00000624619 620 ntBASIC20.75■□□□□ 0.91
RNF216Q9NWF9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF216Q9NWF9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms