Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 FAM220CP-201ENST00000395253 831 ntBASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 AC106730.1-201ENST00000566722 1090 ntBASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 AC034236.2-201ENST00000606662 1610 ntBASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ARHGEF3Q9NR81 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 BX842568.4-201ENST00000421222 227 ntBASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 AL591684.3-201ENST00000605187 298 ntBASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 AC148477.8-201ENST00000624298 468 ntBASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 PMS2P7-201ENST00000506558 1336 ntBASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 AC009053.2-201ENST00000563701 2365 ntBASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARHGEF3Q9NR81 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 TERC-201ENST00000602385 541 ntBASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 AC243591.1-201ENST00000452967 1364 ntBASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ARHGEF3Q9NR81 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ARHGEF3Q9NR81 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ARHGEF3Q9NR81 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.89■□□□□ 0.61
ARHGEF3Q9NR81 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF3Q9NR81 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF3Q9NR81 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF3Q9NR81 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.89■□□□□ 0.61
ARHGEF3Q9NR81 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms