Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 INGX-201ENST00000359239 846 ntBASIC16.19■□□□□ 0.18
HINT3Q9NQE9 AC113347.1-201ENST00000413321 391 ntBASIC16.19■□□□□ 0.18
HINT3Q9NQE9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 LIN28AP1-201ENST00000429574 405 ntBASIC16.19■□□□□ 0.18
HINT3Q9NQE9 AL137013.1-201ENST00000432946 1228 ntBASIC16.19■□□□□ 0.18
HINT3Q9NQE9 FAM210CP-201ENST00000445714 574 ntBASIC16.19■□□□□ 0.18
HINT3Q9NQE9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 KRT18P21-201ENST00000515767 1272 ntBASIC16.19■□□□□ 0.18
HINT3Q9NQE9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 AC010653.2-201ENST00000623505 997 ntBASIC16.19■□□□□ 0.18
HINT3Q9NQE9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 AC092338.2-201ENST00000568827 1415 ntBASIC16.19■□□□□ 0.18
HINT3Q9NQE9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 AL138688.1-201ENST00000624851 1594 ntBASIC16.18■□□□□ 0.18
HINT3Q9NQE9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 HMGA1P5-201ENST00000412453 271 ntBASIC16.18■□□□□ 0.18
HINT3Q9NQE9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 AC007663.1-201ENST00000438948 1240 ntBASIC16.18■□□□□ 0.18
HINT3Q9NQE9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 AC010240.3-201ENST00000607688 395 ntBASIC16.18■□□□□ 0.18
HINT3Q9NQE9 FAM87A-204ENST00000613235 858 ntBASIC16.18■□□□□ 0.18
HINT3Q9NQE9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HINT3Q9NQE9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 AC005521.1-201ENST00000393351 872 ntBASIC16.17■□□□□ 0.18
HINT3Q9NQE9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 ATP5G1P1-201ENST00000448724 379 ntBASIC16.17■□□□□ 0.18
HINT3Q9NQE9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 CROCCP2-202ENST00000412962 2773 ntBASIC16.17■□□□□ 0.18
HINT3Q9NQE9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms