Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TIMMDC1Q9NPL8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 ANO7L1-203ENST00000602586 1720 ntBASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 AL441883.1-201ENST00000566170 1045 ntBASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMMDC1Q9NPL8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 FEM1AP3-201ENST00000403722 1741 ntBASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 MIR3180-5-201ENST00000583743 153 ntBASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMMDC1Q9NPL8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TIMMDC1Q9NPL8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms