Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC135776.1-201ENST00000319817 2481 ntBASIC26.68■■□□□ 1.86
SCAF1Q9H7N4 AC243591.1-201ENST00000452967 1364 ntBASIC26.68■■□□□ 1.86
SCAF1Q9H7N4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC26.68■■□□□ 1.86
SCAF1Q9H7N4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF1Q9H7N4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF1Q9H7N4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF1Q9H7N4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SCAF1Q9H7N4 AL596257.1-201ENST00000641463 2694 ntBASIC26.68■■□□□ 1.86
SCAF1Q9H7N4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 HMGB3P14-201ENST00000494195 599 ntBASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 MIR4674-201ENST00000582457 87 ntBASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SCAF1Q9H7N4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 SIRPAP1-201ENST00000448467 1770 ntBASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SCAF1Q9H7N4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 AL136370.1-201ENST00000608166 691 ntBASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 REXO1L6P-202ENST00000619970 1078 ntBASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 HTR5BP-201ENST00000430851 1154 ntBASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 AC148477.8-201ENST00000624298 468 ntBASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC26.65■■□□□ 1.86
SCAF1Q9H7N4 ZNF259P1-201ENST00000407656 1365 ntBASIC26.64■■□□□ 1.86
SCAF1Q9H7N4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
SCAF1Q9H7N4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC26.64■■□□□ 1.86
SCAF1Q9H7N4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SCAF1Q9H7N4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SCAF1Q9H7N4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms