Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 VENTXP5-201ENST00000523979 775 ntBASIC19.1■□□□□ 0.65
SYNCQ9H7C4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 HYMAI.1-201ENST00000620949 238 ntBASIC19.1■□□□□ 0.65
SYNCQ9H7C4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SYNCQ9H7C4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 AC132938.6-201ENST00000623828 1655 ntBASIC19.09■□□□□ 0.65
SYNCQ9H7C4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.09■□□□□ 0.65
SYNCQ9H7C4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 AL133373.2-201ENST00000623187 2828 ntBASIC19.09■□□□□ 0.65
SYNCQ9H7C4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SYNCQ9H7C4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SYNCQ9H7C4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.08■□□□□ 0.64
SYNCQ9H7C4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYNCQ9H7C4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SYNCQ9H7C4 MIR662-201ENST00000384847 95 ntBASIC19.08■□□□□ 0.64
SYNCQ9H7C4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.08■□□□□ 0.64
SYNCQ9H7C4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms