Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
MMP28Q9H239 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.85■□□□□ 0.13
MMP28Q9H239 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
MMP28Q9H239 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 MTMR9LP-203ENST00000426597 1545 ntBASIC15.85■□□□□ 0.13
MMP28Q9H239 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.85■□□□□ 0.13
MMP28Q9H239 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.85■□□□□ 0.13
MMP28Q9H239 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.85■□□□□ 0.13
MMP28Q9H239 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
MMP28Q9H239 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 KRT16P5-201ENST00000455284 522 ntBASIC15.85■□□□□ 0.13
MMP28Q9H239 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
MMP28Q9H239 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.85■□□□□ 0.13
MMP28Q9H239 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.85■□□□□ 0.13
MMP28Q9H239 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
MMP28Q9H239 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.85■□□□□ 0.13
MMP28Q9H239 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP28Q9H239 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.85■□□□□ 0.13
MMP28Q9H239 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP28Q9H239 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP28Q9H239 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
MMP28Q9H239 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP28Q9H239 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
MMP28Q9H239 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
MMP28Q9H239 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
MMP28Q9H239 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 CROCCP2-202ENST00000412962 2773 ntBASIC15.84■□□□□ 0.13
MMP28Q9H239 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP28Q9H239 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
MMP28Q9H239 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP28Q9H239 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.84■□□□□ 0.13
MMP28Q9H239 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP28Q9H239 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.84■□□□□ 0.13
MMP28Q9H239 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP28Q9H239 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.84■□□□□ 0.13
MMP28Q9H239 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
MMP28Q9H239 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP28Q9H239 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP28Q9H239 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.84■□□□□ 0.13
MMP28Q9H239 AC008556.1-201ENST00000610908 2040 ntBASIC15.84■□□□□ 0.13
MMP28Q9H239 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP28Q9H239 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
MMP28Q9H239 AGGF1P2-201ENST00000426656 2106 ntBASIC15.83■□□□□ 0.13
MMP28Q9H239 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
MMP28Q9H239 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MMP28Q9H239 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
MMP28Q9H239 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
MMP28Q9H239 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP28Q9H239 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP28Q9H239 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP28Q9H239 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP28Q9H239 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP28Q9H239 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MMP28Q9H239 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MMP28Q9H239 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
MMP28Q9H239 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP28Q9H239 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
MMP28Q9H239 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP28Q9H239 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.83■□□□□ 0.12
MMP28Q9H239 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
MMP28Q9H239 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms