Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 ABHD17AP1-201ENST00000358206 933 ntBASIC18.66■□□□□ 0.58
DDX47Q9H0S4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 RPS2P55-201ENST00000397318 883 ntBASIC18.66■□□□□ 0.58
DDX47Q9H0S4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 AC107956.1-201ENST00000494359 873 ntBASIC18.66■□□□□ 0.58
DDX47Q9H0S4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 AC010240.3-201ENST00000607688 395 ntBASIC18.66■□□□□ 0.58
DDX47Q9H0S4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX47Q9H0S4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DDX47Q9H0S4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDX47Q9H0S4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 HLA-J-201ENST00000462773 1622 ntBASIC18.64■□□□□ 0.57
DDX47Q9H0S4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.64■□□□□ 0.57
DDX47Q9H0S4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.64■□□□□ 0.57
DDX47Q9H0S4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 TSPY17P-201ENST00000450329 467 ntBASIC18.64■□□□□ 0.57
DDX47Q9H0S4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DDX47Q9H0S4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX47Q9H0S4 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms