Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 AC113404.2-201ENST00000507884 177 ntBASIC16.51■□□□□ 0.23
TRIM2Q9C040 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 NTF6B-201ENST00000591913 560 ntBASIC16.51■□□□□ 0.23
TRIM2Q9C040 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 LINC00896-202ENST00000609602 2128 ntBASIC16.51■□□□□ 0.23
TRIM2Q9C040 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM2Q9C040 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TRIM2Q9C040 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 AK4P3-201ENST00000418260 669 ntBASIC16.5■□□□□ 0.23
TRIM2Q9C040 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM2Q9C040 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM2Q9C040 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 AC117947.1-201ENST00000427448 529 ntBASIC16.49■□□□□ 0.23
TRIM2Q9C040 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 COX11P1-201ENST00000489116 835 ntBASIC16.49■□□□□ 0.23
TRIM2Q9C040 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 AL023973.1-201ENST00000624619 620 ntBASIC16.49■□□□□ 0.23
TRIM2Q9C040 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms