Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRGV9Q99603 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRGV9Q99603 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRGV9Q99603 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 TSPY7P-201ENST00000431358 1114 ntBASIC13.98□□□□□ -0.17
TRGV9Q99603 AC009947.2-201ENST00000444014 672 ntBASIC13.98□□□□□ -0.17
TRGV9Q99603 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRGV9Q99603 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.98□□□□□ -0.17
TRGV9Q99603 NEK4P2-201ENST00000580004 1012 ntBASIC13.98□□□□□ -0.17
TRGV9Q99603 LINC01451-201ENST00000623792 534 ntBASIC13.98□□□□□ -0.17
TRGV9Q99603 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 LINC00602-201ENST00000629776 2065 ntBASIC13.98□□□□□ -0.17
TRGV9Q99603 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.98□□□□□ -0.17
TRGV9Q99603 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRGV9Q99603 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRGV9Q99603 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRGV9Q99603 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRGV9Q99603 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRGV9Q99603 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRGV9Q99603 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 AC009053.2-201ENST00000563701 2365 ntBASIC13.97□□□□□ -0.17
TRGV9Q99603 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRGV9Q99603 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TRGV9Q99603 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.97□□□□□ -0.17
TRGV9Q99603 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.97□□□□□ -0.17
TRGV9Q99603 PVRIG2P-201ENST00000435460 978 ntBASIC13.97□□□□□ -0.17
TRGV9Q99603 AC113404.2-201ENST00000507884 177 ntBASIC13.97□□□□□ -0.17
TRGV9Q99603 AC008550.1-201ENST00000511500 884 ntBASIC13.97□□□□□ -0.17
TRGV9Q99603 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.97□□□□□ -0.17
TRGV9Q99603 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRGV9Q99603 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.97□□□□□ -0.17
TRGV9Q99603 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV9Q99603 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV9Q99603 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.97□□□□□ -0.17
TRGV9Q99603 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV9Q99603 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV9Q99603 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRGV9Q99603 KRT17P2-201ENST00000300992 1314 ntBASIC13.96□□□□□ -0.17
TRGV9Q99603 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV9Q99603 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV9Q99603 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRGV9Q99603 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV9Q99603 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV9Q99603 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV9Q99603 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV9Q99603 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV9Q99603 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV9Q99603 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRGV9Q99603 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV9Q99603 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV9Q99603 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms