Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 MIR3180-5-201ENST00000583743 153 ntBASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 AL138688.1-201ENST00000624851 1594 ntBASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 OR6D1P-203ENST00000641209 4860 ntBASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 LINC01126-201ENST00000623515 1646 ntBASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC47A1Q96FL8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 AC036111.1-201ENST00000533973 1582 ntBASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 AL121761.2-201ENST00000598007 1648 ntBASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC47A1Q96FL8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 SLC25A1P2-201ENST00000430693 912 ntBASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 RBM17P1-201ENST00000453646 1190 ntBASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SLC47A1Q96FL8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.89■□□□□ 0.3
SLC47A1Q96FL8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.89■□□□□ 0.3
SLC47A1Q96FL8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC47A1Q96FL8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC47A1Q96FL8 CROCCP2-202ENST00000412962 2773 ntBASIC16.89■□□□□ 0.3
SLC47A1Q96FL8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC47A1Q96FL8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms