Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.27■■□□□ 1
DDX11Q96FC9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.27■■□□□ 1
DDX11Q96FC9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.27■■□□□ 1
DDX11Q96FC9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
DDX11Q96FC9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.27■■□□□ 1
DDX11Q96FC9 RN7SL510P-201ENST00000581311 263 ntBASIC21.27■■□□□ 1
DDX11Q96FC9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.27■■□□□ 1
DDX11Q96FC9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
DDX11Q96FC9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.27■■□□□ 1
DDX11Q96FC9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.27■■□□□ 1
DDX11Q96FC9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.27■■□□□ 1
DDX11Q96FC9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX11Q96FC9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.27■□□□□ 0.99
DDX11Q96FC9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX11Q96FC9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX11Q96FC9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
DDX11Q96FC9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.27■□□□□ 0.99
DDX11Q96FC9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.27■□□□□ 0.99
DDX11Q96FC9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.27■□□□□ 0.99
DDX11Q96FC9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 BCL2-203ENST00000589955 5011 ntBASIC21.26■□□□□ 0.99
DDX11Q96FC9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX11Q96FC9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX11Q96FC9 AC134043.2-201ENST00000624206 2238 ntBASIC21.25■□□□□ 0.99
DDX11Q96FC9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX11Q96FC9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX11Q96FC9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 AC111152.3-201ENST00000569699 673 ntBASIC21.25■□□□□ 0.99
DDX11Q96FC9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX11Q96FC9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX11Q96FC9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DDX11Q96FC9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX11Q96FC9 NUS1P1-201ENST00000446295 882 ntBASIC21.24■□□□□ 0.99
DDX11Q96FC9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX11Q96FC9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms