Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AP002383.4-201ENST00000442518 975 ntBASIC19.25■□□□□ 0.67
SEMA4DQ92854 BX276092.5-203ENST00000456199 560 ntBASIC19.25■□□□□ 0.67
SEMA4DQ92854 AC091607.1-201ENST00000490318 1060 ntBASIC19.25■□□□□ 0.67
SEMA4DQ92854 GUSBP12-201ENST00000513727 720 ntBASIC19.25■□□□□ 0.67
SEMA4DQ92854 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 AL121672.3-201ENST00000608644 468 ntBASIC19.25■□□□□ 0.67
SEMA4DQ92854 IGHV3-41-201ENST00000613121 348 ntBASIC19.25■□□□□ 0.67
SEMA4DQ92854 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 AP000550.4-202ENST00000639755 178 ntBASIC19.25■□□□□ 0.67
SEMA4DQ92854 AC026471.1-201ENST00000564629 3026 ntBASIC19.25■□□□□ 0.67
SEMA4DQ92854 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 AL353801.3-201ENST00000609898 542 ntBASIC19.24■□□□□ 0.67
SEMA4DQ92854 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4DQ92854 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEMA4DQ92854 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 CHCHD2P8-201ENST00000429873 447 ntBASIC19.23■□□□□ 0.67
SEMA4DQ92854 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 AC090616.6-201ENST00000582640 721 ntBASIC19.23■□□□□ 0.67
SEMA4DQ92854 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SEMA4DQ92854 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4DQ92854 AC138932.1-201ENST00000534164 6830 ntBASIC19.22■□□□□ 0.67
SEMA4DQ92854 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms