Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.62■□□□□ 0.25
CT55Q8WUE5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 MIR1199-201ENST00000621445 119 ntBASIC16.62■□□□□ 0.25
CT55Q8WUE5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 SIRPAP1-201ENST00000448467 1770 ntBASIC16.61■□□□□ 0.25
CT55Q8WUE5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 AC007967.2-201ENST00000432613 625 ntBASIC16.61■□□□□ 0.25
CT55Q8WUE5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 AC006557.2-201ENST00000592985 1240 ntBASIC16.61■□□□□ 0.25
CT55Q8WUE5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.61■□□□□ 0.25
CT55Q8WUE5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 SIGLEC16-201ENST00000599858 1437 ntBASIC16.61■□□□□ 0.25
CT55Q8WUE5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CT55Q8WUE5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CT55Q8WUE5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CT55Q8WUE5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CT55Q8WUE5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CT55Q8WUE5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.6■□□□□ 0.25
CT55Q8WUE5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.6■□□□□ 0.25
CT55Q8WUE5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CT55Q8WUE5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 KRT18P27-201ENST00000427733 1299 ntBASIC16.6■□□□□ 0.25
CT55Q8WUE5 AC009947.1-201ENST00000444350 727 ntBASIC16.6■□□□□ 0.25
CT55Q8WUE5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 AL096828.2-201ENST00000567259 1965 ntBASIC16.6■□□□□ 0.25
CT55Q8WUE5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.6■□□□□ 0.25
CT55Q8WUE5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CT55Q8WUE5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CT55Q8WUE5 PRYP5-201ENST00000451909 266 ntBASIC16.59■□□□□ 0.25
CT55Q8WUE5 RNA5SP416-201ENST00000516838 111 ntBASIC16.59■□□□□ 0.25
CT55Q8WUE5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CT55Q8WUE5 AC005593.1-201ENST00000624894 515 ntBASIC16.59■□□□□ 0.25
CT55Q8WUE5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms