Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF139Q8WU17 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF139Q8WU17 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF139Q8WU17 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF139Q8WU17 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 AC012615.1-201ENST00000565797 1299 ntBASIC18.8■□□□□ 0.6
RNF139Q8WU17 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF139Q8WU17 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 PKD1P1-201ENST00000458669 6805 ntBASIC18.79■□□□□ 0.6
RNF139Q8WU17 AC138028.4-201ENST00000564984 1845 ntBASIC18.79■□□□□ 0.6
RNF139Q8WU17 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 AC022898.2-201ENST00000616822 1312 ntBASIC18.79■□□□□ 0.6
RNF139Q8WU17 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 AC246785.2-201ENST00000432512 513 ntBASIC18.79■□□□□ 0.6
RNF139Q8WU17 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 AC074051.2-201ENST00000565115 352 ntBASIC18.79■□□□□ 0.6
RNF139Q8WU17 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RNF139Q8WU17 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF139Q8WU17 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 AC018470.1-201ENST00000624790 3129 ntBASIC18.78■□□□□ 0.6
RNF139Q8WU17 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 KRT17P6-201ENST00000453795 1220 ntBASIC18.78■□□□□ 0.6
RNF139Q8WU17 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 PRELID1P1-202ENST00000567272 903 ntBASIC18.78■□□□□ 0.6
RNF139Q8WU17 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 FLJ13224-201ENST00000313737 1514 ntBASIC18.78■□□□□ 0.6
RNF139Q8WU17 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF139Q8WU17 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF139Q8WU17 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms