Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 LINC00602-201ENST00000629776 2065 ntBASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 AC024563.2-201ENST00000603282 481 ntBASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 AL136038.4-201ENST00000603606 1261 ntBASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 AC139887.4-201ENST00000607877 719 ntBASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF3IP1Q8TDR0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 AC005521.1-201ENST00000393351 872 ntBASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 FAM8A6P-201ENST00000407496 1135 ntBASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 YBX1P2-201ENST00000489612 999 ntBASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 AC011558.1-201ENST00000623459 338 ntBASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF3IP1Q8TDR0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAF3IP1Q8TDR0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms