Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.64■□□□□ 0.73
KLHDC9Q8NEP7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KLHDC9Q8NEP7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
KLHDC9Q8NEP7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 CEND1P1-201ENST00000451006 455 ntBASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 AL031432.2-201ENST00000566714 459 ntBASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 AL928711.1-201ENST00000570165 459 ntBASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 AC010654.1-201ENST00000615722 808 ntBASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
KLHDC9Q8NEP7 AL031598.1-201ENST00000561511 1773 ntBASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 AC096734.2-201ENST00000562054 433 ntBASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 PDPK2P-202ENST00000562415 1191 ntBASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KLHDC9Q8NEP7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 OR7E47P-204ENST00000575924 449 ntBASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 AC004877.2-201ENST00000623941 599 ntBASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KLHDC9Q8NEP7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 MRPL20P1-201ENST00000400819 433 ntBASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 RHOQP3-201ENST00000437982 621 ntBASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms