Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.9■□□□□ 0.3
SIMC1Q8NDZ2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SIMC1Q8NDZ2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SIMC1Q8NDZ2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.89■□□□□ 0.3
SIMC1Q8NDZ2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 ZNF444P1-201ENST00000559497 298 ntBASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 AC004263.2-201ENST00000617183 678 ntBASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 AC100803.2-201ENST00000562459 1963 ntBASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SIMC1Q8NDZ2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.88■□□□□ 0.29
SIMC1Q8NDZ2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 KRT18P48-201ENST00000434763 852 ntBASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIMC1Q8NDZ2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms