Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 PCDHB18P-201ENST00000524813 2368 ntBASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 KRT17P6-201ENST00000453795 1220 ntBASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 AL121772.3-201ENST00000610840 674 ntBASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC33Q8N5R6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AC068880.1-201ENST00000507289 2297 ntBASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AC020916.1-201ENST00000587762 1774 ntBASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 PVRIG2P-201ENST00000435460 978 ntBASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AC012615.1-201ENST00000565797 1299 ntBASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AC138894.3-201ENST00000603787 634 ntBASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 AL390719.2-201ENST00000606993 987 ntBASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC33Q8N5R6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 LINC00167-201ENST00000530583 1419 ntBASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 AP000997.3-201ENST00000623333 2250 ntBASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 AP000347.1-202ENST00000435868 847 ntBASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 AC009078.2-202ENST00000463353 338 ntBASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 AC104819.1-201ENST00000504587 486 ntBASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 AC090616.6-201ENST00000582640 721 ntBASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 AL031008.1-201ENST00000619963 541 ntBASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 LTB4R2-202ENST00000528054 3092 ntBASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC33Q8N5R6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms