Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 POM121L3P-201ENST00000419331 1163 ntBASIC16.62■□□□□ 0.25
BEST3Q8N1M1 MTCL1P1-201ENST00000446207 792 ntBASIC16.62■□□□□ 0.25
BEST3Q8N1M1 FDX1P1-201ENST00000449115 551 ntBASIC16.62■□□□□ 0.25
BEST3Q8N1M1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 AC005336.2-201ENST00000593183 939 ntBASIC16.62■□□□□ 0.25
BEST3Q8N1M1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.62■□□□□ 0.25
BEST3Q8N1M1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST3Q8N1M1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 AC018470.1-201ENST00000624790 3129 ntBASIC16.61■□□□□ 0.25
BEST3Q8N1M1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 AKR1C7P-201ENST00000305623 895 ntBASIC16.61■□□□□ 0.25
BEST3Q8N1M1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 AC009078.2-202ENST00000463353 338 ntBASIC16.61■□□□□ 0.25
BEST3Q8N1M1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
BEST3Q8N1M1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 KRT18P65-201ENST00000439811 1286 ntBASIC16.6■□□□□ 0.25
BEST3Q8N1M1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.6■□□□□ 0.25
BEST3Q8N1M1 AL160237.2-201ENST00000556165 472 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms