Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 KRT18P67-201ENST00000432816 1264 ntBASIC19.41■□□□□ 0.7
VPS52Q8N1B4 AF186996.4-201ENST00000467186 377 ntBASIC19.41■□□□□ 0.7
VPS52Q8N1B4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 AC005332.8-201ENST00000622750 2735 ntBASIC19.41■□□□□ 0.7
VPS52Q8N1B4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS52Q8N1B4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 RCN1P2-201ENST00000398357 915 ntBASIC19.4■□□□□ 0.7
VPS52Q8N1B4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 AL031284.1-201ENST00000419297 478 ntBASIC19.4■□□□□ 0.7
VPS52Q8N1B4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 AC068472.1-201ENST00000474589 881 ntBASIC19.4■□□□□ 0.7
VPS52Q8N1B4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 AC008608.2-201ENST00000606089 416 ntBASIC19.4■□□□□ 0.7
VPS52Q8N1B4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.4■□□□□ 0.7
VPS52Q8N1B4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 WIZP1-201ENST00000531444 2299 ntBASIC19.4■□□□□ 0.7
VPS52Q8N1B4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS52Q8N1B4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS52Q8N1B4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS52Q8N1B4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS52Q8N1B4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VPS52Q8N1B4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS52Q8N1B4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS52Q8N1B4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 AC005336.2-201ENST00000593183 939 ntBASIC19.39■□□□□ 0.69
VPS52Q8N1B4 AC148477.8-201ENST00000624298 468 ntBASIC19.39■□□□□ 0.69
VPS52Q8N1B4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms