Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 STK19B-204ENST00000512515 211 ntBASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 AC009949.1-201ENST00000623048 1830 ntBASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.73■□□□□ 0.27
COL27A1Q8IZC6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 AL590787.1-201ENST00000568856 1315 ntBASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.72■□□□□ 0.27
COL27A1Q8IZC6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 BX276092.7-203ENST00000637198 1536 ntBASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 STK25P1-201ENST00000585406 838 ntBASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 AC093677.2-201ENST00000600169 1863 ntBASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 AL139400.1-201ENST00000366220 510 ntBASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 AP002414.1-201ENST00000391405 1147 ntBASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 PRSS29P-201ENST00000440800 595 ntBASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 VN2R19P-201ENST00000442399 1052 ntBASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 AC004877.2-201ENST00000623941 599 ntBASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL27A1Q8IZC6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.71■□□□□ 0.26
COL27A1Q8IZC6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL27A1Q8IZC6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms