Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SMC5Q8IY18 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SMC5Q8IY18 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
SMC5Q8IY18 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.14■■□□□ 1.13
SMC5Q8IY18 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMC5Q8IY18 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMC5Q8IY18 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMC5Q8IY18 AK4P3-201ENST00000418260 669 ntBASIC22.14■■□□□ 1.13
SMC5Q8IY18 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.14■■□□□ 1.13
SMC5Q8IY18 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.14■■□□□ 1.13
SMC5Q8IY18 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.14■■□□□ 1.13
SMC5Q8IY18 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.14■■□□□ 1.13
SMC5Q8IY18 RNF126P1-202ENST00000569893 925 ntBASIC22.14■■□□□ 1.13
SMC5Q8IY18 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMC5Q8IY18 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
SMC5Q8IY18 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMC5Q8IY18 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.14■■□□□ 1.13
SMC5Q8IY18 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMC5Q8IY18 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC22.14■■□□□ 1.13
SMC5Q8IY18 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC22.13■■□□□ 1.13
SMC5Q8IY18 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.13■■□□□ 1.13
SMC5Q8IY18 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SMC5Q8IY18 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.13■■□□□ 1.13
SMC5Q8IY18 AC005104.2-201ENST00000427818 678 ntBASIC22.13■■□□□ 1.13
SMC5Q8IY18 MTCL1P1-201ENST00000446207 792 ntBASIC22.13■■□□□ 1.13
SMC5Q8IY18 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.13■■□□□ 1.13
SMC5Q8IY18 ZNF444P1-201ENST00000559497 298 ntBASIC22.13■■□□□ 1.13
SMC5Q8IY18 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.13■■□□□ 1.13
SMC5Q8IY18 AC083849.1-201ENST00000615227 514 ntBASIC22.13■■□□□ 1.13
SMC5Q8IY18 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC22.13■■□□□ 1.13
SMC5Q8IY18 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SMC5Q8IY18 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMC5Q8IY18 AP001094.4-201ENST00000579008 2176 ntBASIC22.12■■□□□ 1.13
SMC5Q8IY18 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.12■■□□□ 1.13
SMC5Q8IY18 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.12■■□□□ 1.13
SMC5Q8IY18 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SMC5Q8IY18 AC063952.2-201ENST00000498792 1227 ntBASIC22.12■■□□□ 1.13
SMC5Q8IY18 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.12■■□□□ 1.13
SMC5Q8IY18 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 AC005332.3-201ENST00000589904 676 ntBASIC22.12■■□□□ 1.13
SMC5Q8IY18 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.12■■□□□ 1.13
SMC5Q8IY18 LINC01023-201ENST00000606054 436 ntBASIC22.12■■□□□ 1.13
SMC5Q8IY18 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.12■■□□□ 1.13
SMC5Q8IY18 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SMC5Q8IY18 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC22.12■■□□□ 1.13
SMC5Q8IY18 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.12■■□□□ 1.13
SMC5Q8IY18 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMC5Q8IY18 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMC5Q8IY18 PRORSD1P-202ENST00000563365 2154 ntBASIC22.11■■□□□ 1.13
SMC5Q8IY18 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SMC5Q8IY18 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms