Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 KRT8P10-201ENST00000450021 1447 ntBASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 AF238378.1-201ENST00000526806 358 ntBASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 AL121912.1-201ENST00000603683 238 ntBASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 AC009113.1-201ENST00000570267 2443 ntBASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN4BQ8IWT1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 AC009078.2-202ENST00000463353 338 ntBASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 AC011467.2-201ENST00000598425 242 ntBASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 AC104692.2-201ENST00000603054 253 ntBASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN4BQ8IWT1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 INTS4P1-201ENST00000438455 1935 ntBASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 KRT8P47-201ENST00000604727 1398 ntBASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 DUTP2-201ENST00000519164 463 ntBASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 AL160237.2-201ENST00000556165 472 ntBASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN4BQ8IWT1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN4BQ8IWT1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms