Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC83Q8IWF9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 SPDYE15P-201ENST00000424157 909 ntBASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 AC024563.2-201ENST00000603282 481 ntBASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 AC140113.3-201ENST00000605663 199 ntBASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 AC133561.5-201ENST00000635547 218 ntBASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 AL391807.1-203ENST00000604392 2365 ntBASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC83Q8IWF9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 AC009949.1-201ENST00000623048 1830 ntBASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 LIN28AP1-201ENST00000429574 405 ntBASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 AL136038.4-201ENST00000603606 1261 ntBASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC83Q8IWF9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 ATP5G1P1-201ENST00000448724 379 ntBASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 AC113404.2-201ENST00000507884 177 ntBASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC83Q8IWF9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 COX11P1-201ENST00000489116 835 ntBASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms