Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMC4Q7Z404 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMC4Q7Z404 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TMC4Q7Z404 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.74■■□□□ 1.07
TMC4Q7Z404 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TMC4Q7Z404 AC006504.4-201ENST00000592118 1568 ntBASIC21.74■■□□□ 1.07
TMC4Q7Z404 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.74■■□□□ 1.07
TMC4Q7Z404 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
TMC4Q7Z404 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.73■■□□□ 1.07
TMC4Q7Z404 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TMC4Q7Z404 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 VN2R19P-201ENST00000442399 1052 ntBASIC21.73■■□□□ 1.07
TMC4Q7Z404 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.73■■□□□ 1.07
TMC4Q7Z404 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.73■■□□□ 1.07
TMC4Q7Z404 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.73■■□□□ 1.07
TMC4Q7Z404 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.73■■□□□ 1.07
TMC4Q7Z404 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMC4Q7Z404 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.73■■□□□ 1.07
TMC4Q7Z404 SIRPAP1-201ENST00000448467 1770 ntBASIC21.73■■□□□ 1.07
TMC4Q7Z404 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
TMC4Q7Z404 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TMC4Q7Z404 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMC4Q7Z404 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMC4Q7Z404 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMC4Q7Z404 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMC4Q7Z404 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMC4Q7Z404 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMC4Q7Z404 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 AC108073.2-201ENST00000464002 357 ntBASIC21.72■■□□□ 1.07
TMC4Q7Z404 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 AL355385.1-201ENST00000606123 409 ntBASIC21.72■■□□□ 1.07
TMC4Q7Z404 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
TMC4Q7Z404 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMC4Q7Z404 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMC4Q7Z404 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMC4Q7Z404 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
TMC4Q7Z404 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TMC4Q7Z404 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.71■■□□□ 1.07
TMC4Q7Z404 HMGN1P19-201ENST00000436976 333 ntBASIC21.71■■□□□ 1.07
TMC4Q7Z404 RPS15P9-201ENST00000494093 319 ntBASIC21.71■■□□□ 1.07
TMC4Q7Z404 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.71■■□□□ 1.07
TMC4Q7Z404 AC116407.2-201ENST00000613639 860 ntBASIC21.71■■□□□ 1.07
TMC4Q7Z404 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
TMC4Q7Z404 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMC4Q7Z404 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.7■■□□□ 1.07
TMC4Q7Z404 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TMC4Q7Z404 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 HCG4B-203ENST00000450128 991 ntBASIC21.7■■□□□ 1.06
TMC4Q7Z404 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.7■■□□□ 1.06
TMC4Q7Z404 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TMC4Q7Z404 AC027796.2-201ENST00000575326 344 ntBASIC21.7■■□□□ 1.06
TMC4Q7Z404 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.7■■□□□ 1.06
TMC4Q7Z404 AC019129.2-201ENST00000609837 1235 ntBASIC21.7■■□□□ 1.06
TMC4Q7Z404 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.7■■□□□ 1.06
TMC4Q7Z404 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.7■■□□□ 1.06
TMC4Q7Z404 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.7■■□□□ 1.06
TMC4Q7Z404 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMC4Q7Z404 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms