Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTR9Q6PD62 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTR9Q6PD62 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTR9Q6PD62 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 BICD1-207ENST00000551848 1962 ntBASIC21.23■□□□□ 0.99
CTR9Q6PD62 AC100803.2-201ENST00000562459 1963 ntBASIC21.23■□□□□ 0.99
CTR9Q6PD62 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTR9Q6PD62 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 AC132008.2-207ENST00000454517 770 ntBASIC21.23■□□□□ 0.99
CTR9Q6PD62 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTR9Q6PD62 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 AL031008.1-201ENST00000619963 541 ntBASIC21.23■□□□□ 0.99
CTR9Q6PD62 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTR9Q6PD62 AC022898.2-201ENST00000616822 1312 ntBASIC21.23■□□□□ 0.99
CTR9Q6PD62 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.23■□□□□ 0.99
CTR9Q6PD62 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTR9Q6PD62 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CTR9Q6PD62 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.22■□□□□ 0.99
CTR9Q6PD62 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.22■□□□□ 0.99
CTR9Q6PD62 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CTR9Q6PD62 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 AC096633.1-201ENST00000422446 749 ntBASIC21.22■□□□□ 0.99
CTR9Q6PD62 AC007967.3-201ENST00000434308 558 ntBASIC21.22■□□□□ 0.99
CTR9Q6PD62 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 AF238378.1-201ENST00000526806 358 ntBASIC21.22■□□□□ 0.99
CTR9Q6PD62 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.22■□□□□ 0.99
CTR9Q6PD62 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.22■□□□□ 0.99
CTR9Q6PD62 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
CTR9Q6PD62 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.22■□□□□ 0.99
CTR9Q6PD62 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTR9Q6PD62 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.21■□□□□ 0.99
CTR9Q6PD62 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CTR9Q6PD62 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.21■□□□□ 0.99
CTR9Q6PD62 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CTR9Q6PD62 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.21■□□□□ 0.99
CTR9Q6PD62 AC010460.3-201ENST00000511359 1579 ntBASIC21.21■□□□□ 0.99
CTR9Q6PD62 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.21■□□□□ 0.99
CTR9Q6PD62 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CTR9Q6PD62 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CTR9Q6PD62 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTR9Q6PD62 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CTR9Q6PD62 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CTR9Q6PD62 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CTR9Q6PD62 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
CTR9Q6PD62 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTR9Q6PD62 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTR9Q6PD62 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.2■□□□□ 0.98
CTR9Q6PD62 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTR9Q6PD62 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTR9Q6PD62 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTR9Q6PD62 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTR9Q6PD62 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTR9Q6PD62 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.2■□□□□ 0.98
CTR9Q6PD62 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms