Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 MRPL20P1-201ENST00000400819 433 ntBASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 IGLL3P-201ENST00000412472 434 ntBASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 AL805961.1-202ENST00000641562 540 ntBASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CNKSR3Q6P9H4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNKSR3Q6P9H4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.14■□□□□ 0.66
CNKSR3Q6P9H4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 PDPK2P-202ENST00000562415 1191 ntBASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CNKSR3Q6P9H4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNKSR3Q6P9H4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 AC096734.2-201ENST00000562054 433 ntBASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 AC019129.2-201ENST00000609837 1235 ntBASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 AC004877.2-201ENST00000623941 599 ntBASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 AC010507.1-201ENST00000633895 436 ntBASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 AC116562.4-201ENST00000641316 2276 ntBASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CNKSR3Q6P9H4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNKSR3Q6P9H4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms