Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 AC134043.2-201ENST00000624206 2238 ntBASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
TMEM53Q6P2H8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM53Q6P2H8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
TMEM53Q6P2H8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM53Q6P2H8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 EGLN1P1-201ENST00000531623 762 ntBASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 AL512353.2-201ENST00000448759 1962 ntBASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 AC108860.2-201ENST00000562760 2183 ntBASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TMEM53Q6P2H8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 FER1L4-210ENST00000615531 5998 ntBASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM53Q6P2H8 AL031598.1-201ENST00000561511 1773 ntBASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 KRT8P32-201ENST00000512863 1461 ntBASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 TSPY14P-201ENST00000303979 915 ntBASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 AL353719.1-201ENST00000566847 864 ntBASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM53Q6P2H8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms