Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 KRT18P11-201ENST00000435214 1283 ntBASIC13.56□□□□□ -0.24
MRPL54Q6P161 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL54Q6P161 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
MRPL54Q6P161 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
MRPL54Q6P161 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL54Q6P161 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
MRPL54Q6P161 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL54Q6P161 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
MRPL54Q6P161 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL54Q6P161 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL54Q6P161 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.54□□□□□ -0.24
MRPL54Q6P161 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.54□□□□□ -0.24
MRPL54Q6P161 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.54□□□□□ -0.24
MRPL54Q6P161 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.54□□□□□ -0.24
MRPL54Q6P161 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.54□□□□□ -0.24
MRPL54Q6P161 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.54□□□□□ -0.24
MRPL54Q6P161 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL54Q6P161 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms