Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST2H2AA3Q6FI13 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 HBZP1-201ENST00000354915 429 ntBASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 KRT18P38-201ENST00000449496 1282 ntBASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 AC116407.2-201ENST00000613639 860 ntBASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST2H2AA3Q6FI13 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HIST2H2AA3Q6FI13 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 MIR662-201ENST00000384847 95 ntBASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 TSPY12P-201ENST00000421279 868 ntBASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 KRT18P65-201ENST00000439811 1286 ntBASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 DUX4L26-201ENST00000489078 1255 ntBASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 AC022616.7-201ENST00000525383 220 ntBASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
HIST2H2AA3Q6FI13 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST2H2AA3Q6FI13 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST2H2AA3Q6FI13 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HIST2H2AA3Q6FI13 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST2H2AA3Q6FI13 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms