Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 CD177P1-201ENST00000606252 935 ntBASIC17.3■□□□□ 0.36
RNF220Q5VTB9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 FAM197Y1-201ENST00000421178 764 ntBASIC17.29■□□□□ 0.36
RNF220Q5VTB9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 AC142381.4-202ENST00000563973 229 ntBASIC17.29■□□□□ 0.36
RNF220Q5VTB9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 AP000692.2-201ENST00000608391 879 ntBASIC17.29■□□□□ 0.36
RNF220Q5VTB9 DGCR10-201ENST00000609839 495 ntBASIC17.29■□□□□ 0.36
RNF220Q5VTB9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF220Q5VTB9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 AC012618.2-201ENST00000428058 849 ntBASIC17.28■□□□□ 0.36
RNF220Q5VTB9 GCSHP5-201ENST00000443090 522 ntBASIC17.28■□□□□ 0.36
RNF220Q5VTB9 UBE2SP1-201ENST00000450587 669 ntBASIC17.28■□□□□ 0.36
RNF220Q5VTB9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF220Q5VTB9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms