Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 AC100803.2-201ENST00000562459 1963 ntBASIC20.38■□□□□ 0.85
LONRF3Q496Y0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 MIR3917-201ENST00000580971 93 ntBASIC20.38■□□□□ 0.85
LONRF3Q496Y0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 HBZP1-201ENST00000354915 429 ntBASIC20.37■□□□□ 0.85
LONRF3Q496Y0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 DUTP2-201ENST00000519164 463 ntBASIC20.37■□□□□ 0.85
LONRF3Q496Y0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
LONRF3Q496Y0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 HCG4P8-203ENST00000443049 980 ntBASIC20.36■□□□□ 0.85
LONRF3Q496Y0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 AC069148.1-201ENST00000608741 768 ntBASIC20.36■□□□□ 0.85
LONRF3Q496Y0 AL157888.1-201ENST00000631930 593 ntBASIC20.36■□□□□ 0.85
LONRF3Q496Y0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.36■□□□□ 0.85
LONRF3Q496Y0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 AC139713.2-201ENST00000641328 2723 ntBASIC20.35■□□□□ 0.85
LONRF3Q496Y0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 AL645608.8-201ENST00000606034 2086 ntBASIC20.35■□□□□ 0.85
LONRF3Q496Y0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 AC034232.1-201ENST00000506026 1064 ntBASIC20.35■□□□□ 0.85
LONRF3Q496Y0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 AL121894.2-201ENST00000602977 491 ntBASIC20.35■□□□□ 0.85
LONRF3Q496Y0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.35■□□□□ 0.85
LONRF3Q496Y0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms