Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.61■□□□□ 0.73
CDR1P51861 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDR1P51861 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.61■□□□□ 0.73
CDR1P51861 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CDR1P51861 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.61■□□□□ 0.73
CDR1P51861 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.61■□□□□ 0.73
CDR1P51861 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.61■□□□□ 0.73
CDR1P51861 AC011498.5-201ENST00000592027 486 ntBASIC19.61■□□□□ 0.73
CDR1P51861 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.61■□□□□ 0.73
CDR1P51861 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.61■□□□□ 0.73
CDR1P51861 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.61■□□□□ 0.73
CDR1P51861 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDR1P51861 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CDR1P51861 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDR1P51861 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR1P51861 HOXB1-202ENST00000577092 1414 ntBASIC19.6■□□□□ 0.73
CDR1P51861 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CDR1P51861 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDR1P51861 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDR1P51861 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.6■□□□□ 0.73
CDR1P51861 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.6■□□□□ 0.73
CDR1P51861 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.6■□□□□ 0.73
CDR1P51861 AL121894.2-201ENST00000602977 491 ntBASIC19.6■□□□□ 0.73
CDR1P51861 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 AC083906.6-201ENST00000641366 219 ntBASIC19.6■□□□□ 0.73
CDR1P51861 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.6■□□□□ 0.73
CDR1P51861 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR1P51861 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.6■□□□□ 0.73
CDR1P51861 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.6■□□□□ 0.73
CDR1P51861 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.59■□□□□ 0.73
CDR1P51861 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CDR1P51861 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
CDR1P51861 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDR1P51861 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 HLA-F-220ENST00000434407 884 ntBASIC19.59■□□□□ 0.73
CDR1P51861 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.59■□□□□ 0.73
CDR1P51861 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.59■□□□□ 0.73
CDR1P51861 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.59■□□□□ 0.73
CDR1P51861 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.59■□□□□ 0.73
CDR1P51861 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.59■□□□□ 0.73
CDR1P51861 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDR1P51861 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.59■□□□□ 0.73
CDR1P51861 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.59■□□□□ 0.73
CDR1P51861 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.59■□□□□ 0.73
CDR1P51861 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR1P51861 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 AC016734.2-201ENST00000624325 1377 ntBASIC19.58■□□□□ 0.73
CDR1P51861 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CDR1P51861 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CDR1P51861 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.58■□□□□ 0.73
CDR1P51861 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.58■□□□□ 0.73
CDR1P51861 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.58■□□□□ 0.73
CDR1P51861 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDR1P51861 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.58■□□□□ 0.73
CDR1P51861 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDR1P51861 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDR1P51861 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.58■□□□□ 0.72
CDR1P51861 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms