Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC31.78■■■□□ 2.68
SMARCA4P51532 AC006116.8-202ENST00000587620 1550 ntBASIC31.78■■■□□ 2.68
SMARCA4P51532 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCA4P51532 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC31.78■■■□□ 2.68
SMARCA4P51532 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC31.78■■■□□ 2.68
SMARCA4P51532 MED16-214ENST00000617672 554 ntTSL 5 BASIC31.78■■■□□ 2.68
SMARCA4P51532 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC31.78■■■□□ 2.68
SMARCA4P51532 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
SMARCA4P51532 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC31.78■■■□□ 2.68
SMARCA4P51532 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA4P51532 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
SMARCA4P51532 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA4P51532 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC31.77■■■□□ 2.68
SMARCA4P51532 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA4P51532 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCA4P51532 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC31.77■■■□□ 2.68
SMARCA4P51532 SLBP-205ENST00000488267 987 ntTSL 2 BASIC31.77■■■□□ 2.68
SMARCA4P51532 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC31.77■■■□□ 2.68
SMARCA4P51532 AC109462.3-201ENST00000573934 613 ntBASIC31.77■■■□□ 2.68
SMARCA4P51532 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
SMARCA4P51532 TMED1-207ENST00000591695 809 ntTSL 5 BASIC31.77■■■□□ 2.68
SMARCA4P51532 AC023141.13-201ENST00000604991 943 ntBASIC31.77■■■□□ 2.68
SMARCA4P51532 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
SMARCA4P51532 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SMARCA4P51532 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC31.76■■■□□ 2.68
SMARCA4P51532 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC31.76■■■□□ 2.68
SMARCA4P51532 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
SMARCA4P51532 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SMARCA4P51532 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC31.76■■■□□ 2.67
SMARCA4P51532 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
SMARCA4P51532 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC31.76■■■□□ 2.67
SMARCA4P51532 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
SMARCA4P51532 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC31.76■■■□□ 2.67
SMARCA4P51532 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
SMARCA4P51532 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SMARCA4P51532 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC31.76■■■□□ 2.67
SMARCA4P51532 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
SMARCA4P51532 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 CD99-202ENST00000381180 530 ntTSL 2 BASIC31.75■■■□□ 2.67
SMARCA4P51532 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC31.75■■■□□ 2.67
SMARCA4P51532 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC31.75■■■□□ 2.67
SMARCA4P51532 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC31.75■■■□□ 2.67
SMARCA4P51532 AC099522.2-201ENST00000607001 744 ntBASIC31.75■■■□□ 2.67
SMARCA4P51532 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC31.75■■■□□ 2.67
SMARCA4P51532 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC31.75■■■□□ 2.67
SMARCA4P51532 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 STK19B-204ENST00000512515 211 ntBASIC31.75■■■□□ 2.67
SMARCA4P51532 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC31.75■■■□□ 2.67
SMARCA4P51532 AJ011932.1-201ENST00000621707 465 ntBASIC31.75■■■□□ 2.67
SMARCA4P51532 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCA4P51532 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA4P51532 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA4P51532 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
SMARCA4P51532 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA4P51532 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
SMARCA4P51532 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC31.74■■■□□ 2.67
SMARCA4P51532 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC31.74■■■□□ 2.67
SMARCA4P51532 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC31.74■■■□□ 2.67
SMARCA4P51532 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA4P51532 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
SMARCA4P51532 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA4P51532 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA4P51532 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
SMARCA4P51532 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA4P51532 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA4P51532 PC-208ENST00000529047 1607 ntTSL 3 BASIC31.74■■■□□ 2.67
SMARCA4P51532 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA4P51532 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA4P51532 PNKD-204ENST00000436005 978 ntTSL 5 BASIC31.73■■■□□ 2.67
SMARCA4P51532 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA4P51532 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC31.73■■■□□ 2.67
SMARCA4P51532 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
SMARCA4P51532 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC31.73■■■□□ 2.67
SMARCA4P51532 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA4P51532 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC31.73■■■□□ 2.67
SMARCA4P51532 AC007064.4-201ENST00000637740 555 ntBASIC31.73■■■□□ 2.67
SMARCA4P51532 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA4P51532 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA4P51532 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA4P51532 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA4P51532 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCA4P51532 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCA4P51532 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
SMARCA4P51532 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA4P51532 AL627223.1-201ENST00000416693 442 ntBASIC31.72■■■□□ 2.67
SMARCA4P51532 ACTG1P4-201ENST00000425123 1122 ntBASIC31.72■■■□□ 2.67
SMARCA4P51532 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC31.72■■■□□ 2.67
SMARCA4P51532 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC31.72■■■□□ 2.67
SMARCA4P51532 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCA4P51532 Z92544.3-201ENST00000624747 417 ntBASIC31.72■■■□□ 2.67
SMARCA4P51532 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
SMARCA4P51532 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms