Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KRT6CP48668 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
KRT6CP48668 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KRT6CP48668 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
KRT6CP48668 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KRT6CP48668 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KRT6CP48668 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT6CP48668 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
KRT6CP48668 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT6CP48668 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
KRT6CP48668 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT6CP48668 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT6CP48668 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT6CP48668 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KRT6CP48668 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KRT6CP48668 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT6CP48668 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT6CP48668 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT6CP48668 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT6CP48668 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT6CP48668 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 AL138966.2-201ENST00000621997 464 ntBASIC17.38■□□□□ 0.37
KRT6CP48668 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KRT6CP48668 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT6CP48668 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
KRT6CP48668 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KRT6CP48668 LINC00167-201ENST00000530583 1419 ntBASIC17.38■□□□□ 0.37
KRT6CP48668 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT6CP48668 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
KRT6CP48668 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
KRT6CP48668 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KRT6CP48668 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 AC087499.1-201ENST00000418141 1075 ntBASIC17.37■□□□□ 0.37
KRT6CP48668 LIN28AP1-201ENST00000429574 405 ntBASIC17.37■□□□□ 0.37
KRT6CP48668 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT6CP48668 AC113404.2-201ENST00000507884 177 ntBASIC17.37■□□□□ 0.37
KRT6CP48668 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT6CP48668 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 GCSHP2-201ENST00000560971 527 ntBASIC17.37■□□□□ 0.37
KRT6CP48668 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT6CP48668 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KRT6CP48668 AC140113.3-201ENST00000605663 199 ntBASIC17.37■□□□□ 0.37
KRT6CP48668 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT6CP48668 AL031432.5-201ENST00000641059 760 ntBASIC17.37■□□□□ 0.37
KRT6CP48668 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT6CP48668 AC011270.2-201ENST00000624293 2550 ntBASIC17.37■□□□□ 0.37
KRT6CP48668 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT6CP48668 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms