Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HTTP42858 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.99■□□□□ 0.79
HTTP42858 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HTTP42858 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.99■□□□□ 0.79
HTTP42858 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
HTTP42858 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HTTP42858 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HTTP42858 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.99■□□□□ 0.79
HTTP42858 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HTTP42858 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HTTP42858 AC025048.6-201ENST00000634326 1161 ntBASIC19.99■□□□□ 0.79
HTTP42858 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HTTP42858 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HTTP42858 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HTTP42858 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HTTP42858 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HTTP42858 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.98■□□□□ 0.79
HTTP42858 AC100803.2-201ENST00000562459 1963 ntBASIC19.98■□□□□ 0.79
HTTP42858 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.98■□□□□ 0.79
HTTP42858 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.98■□□□□ 0.79
HTTP42858 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
HTTP42858 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HTTP42858 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.98■□□□□ 0.79
HTTP42858 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.98■□□□□ 0.79
HTTP42858 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.98■□□□□ 0.79
HTTP42858 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 AC022494.1-201ENST00000466044 728 ntBASIC19.98■□□□□ 0.79
HTTP42858 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 SPDYE22P-201ENST00000582158 798 ntBASIC19.98■□□□□ 0.79
HTTP42858 AL606495.2-201ENST00000605867 535 ntBASIC19.98■□□□□ 0.79
HTTP42858 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HTTP42858 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HTTP42858 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.98■□□□□ 0.79
HTTP42858 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HTTP42858 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HTTP42858 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.98■□□□□ 0.79
HTTP42858 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.98■□□□□ 0.79
HTTP42858 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.98■□□□□ 0.79
HTTP42858 MYLKP1-201ENST00000509077 1580 ntBASIC19.98■□□□□ 0.79
HTTP42858 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.98■□□□□ 0.79
HTTP42858 AC004449.1-201ENST00000564240 433 ntBASIC19.98■□□□□ 0.79
HTTP42858 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.98■□□□□ 0.79
HTTP42858 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
HTTP42858 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HTTP42858 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.97■□□□□ 0.79
HTTP42858 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
HTTP42858 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.97■□□□□ 0.79
HTTP42858 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.97■□□□□ 0.79
HTTP42858 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HTTP42858 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HTTP42858 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HTTP42858 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
HTTP42858 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.97■□□□□ 0.79
HTTP42858 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.97■□□□□ 0.79
HTTP42858 TFAMP1-201ENST00000412727 736 ntBASIC19.97■□□□□ 0.79
HTTP42858 AC068137.2-201ENST00000605408 478 ntBASIC19.97■□□□□ 0.79
HTTP42858 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HTTP42858 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HTTP42858 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 TSPY16P-201ENST00000449843 468 ntBASIC19.96■□□□□ 0.79
HTTP42858 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.96■□□□□ 0.79
HTTP42858 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
HTTP42858 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.96■□□□□ 0.79
HTTP42858 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.96■□□□□ 0.79
HTTP42858 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.96■□□□□ 0.79
HTTP42858 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.96■□□□□ 0.79
HTTP42858 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HTTP42858 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.96■□□□□ 0.79
HTTP42858 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HTTP42858 RPS15P9-201ENST00000494093 319 ntBASIC19.96■□□□□ 0.79
HTTP42858 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.96■□□□□ 0.79
HTTP42858 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.96■□□□□ 0.79
HTTP42858 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms