Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCNFP41002 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.03■□□□□ 0.48
CCNFP41002 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNFP41002 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNFP41002 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 AC092865.7-201ENST00000641832 219 ntBASIC18.03■□□□□ 0.48
CCNFP41002 AC084018.2-201ENST00000613093 2607 ntBASIC18.03■□□□□ 0.48
CCNFP41002 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNFP41002 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNFP41002 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCNFP41002 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCNFP41002 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNFP41002 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.03■□□□□ 0.48
CCNFP41002 AP001094.4-201ENST00000579008 2176 ntBASIC18.03■□□□□ 0.48
CCNFP41002 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.03■□□□□ 0.48
CCNFP41002 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCNFP41002 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.02■□□□□ 0.48
CCNFP41002 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCNFP41002 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CCNFP41002 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNFP41002 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNFP41002 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNFP41002 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNFP41002 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCNFP41002 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.02■□□□□ 0.48
CCNFP41002 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.02■□□□□ 0.48
CCNFP41002 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.02■□□□□ 0.48
CCNFP41002 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CCNFP41002 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNFP41002 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.02■□□□□ 0.48
CCNFP41002 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNFP41002 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNFP41002 AC133963.1-201ENST00000504166 1679 ntBASIC18.02■□□□□ 0.47
CCNFP41002 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNFP41002 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.02■□□□□ 0.47
CCNFP41002 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNFP41002 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCNFP41002 AD000864.1-201ENST00000624076 2295 ntBASIC18.01■□□□□ 0.47
CCNFP41002 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CCNFP41002 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CCNFP41002 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.01■□□□□ 0.47
CCNFP41002 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CCNFP41002 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CCNFP41002 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNFP41002 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.01■□□□□ 0.47
CCNFP41002 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.01■□□□□ 0.47
CCNFP41002 SEC1P-202ENST00000473944 940 ntBASIC18.01■□□□□ 0.47
CCNFP41002 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.01■□□□□ 0.47
CCNFP41002 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.01■□□□□ 0.47
CCNFP41002 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNFP41002 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.01■□□□□ 0.47
CCNFP41002 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.01■□□□□ 0.47
CCNFP41002 AC024243.1-201ENST00000609234 778 ntBASIC18.01■□□□□ 0.47
CCNFP41002 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNFP41002 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.01■□□□□ 0.47
CCNFP41002 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
CCNFP41002 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNFP41002 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCNFP41002 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNFP41002 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNFP41002 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CCNFP41002 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCNFP41002 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCNFP41002 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18■□□□□ 0.47
CCNFP41002 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18■□□□□ 0.47
CCNFP41002 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCNFP41002 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNFP41002 AC132938.6-201ENST00000623828 1655 ntBASIC18■□□□□ 0.47
CCNFP41002 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCNFP41002 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCNFP41002 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18■□□□□ 0.47
CCNFP41002 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNFP41002 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCNFP41002 KRT18P57-201ENST00000443599 1254 ntBASIC18■□□□□ 0.47
CCNFP41002 AC034232.1-201ENST00000506026 1064 ntBASIC18■□□□□ 0.47
CCNFP41002 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCNFP41002 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCNFP41002 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18■□□□□ 0.47
CCNFP41002 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms