Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CEACAM3P40198 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CEACAM3P40198 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 FZD10-202ENST00000539839 3282 ntBASIC14.62□□□□□ -0.07
CEACAM3P40198 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.62□□□□□ -0.07
CEACAM3P40198 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.62□□□□□ -0.07
CEACAM3P40198 LINC00167-201ENST00000530583 1419 ntBASIC14.62□□□□□ -0.07
CEACAM3P40198 AC116407.4-201ENST00000623319 1061 ntBASIC14.62□□□□□ -0.07
CEACAM3P40198 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.62□□□□□ -0.07
CEACAM3P40198 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.62□□□□□ -0.07
CEACAM3P40198 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CEACAM3P40198 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.62□□□□□ -0.07
CEACAM3P40198 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CEACAM3P40198 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.62□□□□□ -0.07
CEACAM3P40198 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CEACAM3P40198 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CEACAM3P40198 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.61□□□□□ -0.07
CEACAM3P40198 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.61□□□□□ -0.07
CEACAM3P40198 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.61□□□□□ -0.07
CEACAM3P40198 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CEACAM3P40198 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.61□□□□□ -0.07
CEACAM3P40198 VENTXP7-201ENST00000475503 772 ntBASIC14.61□□□□□ -0.07
CEACAM3P40198 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CEACAM3P40198 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.61□□□□□ -0.07
CEACAM3P40198 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.61□□□□□ -0.07
CEACAM3P40198 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.61□□□□□ -0.07
CEACAM3P40198 RNF126P1-202ENST00000569893 925 ntBASIC14.61□□□□□ -0.07
CEACAM3P40198 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.61□□□□□ -0.07
CEACAM3P40198 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.61□□□□□ -0.07
CEACAM3P40198 AL358472.4-201ENST00000633140 710 ntBASIC14.61□□□□□ -0.07
CEACAM3P40198 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.61□□□□□ -0.07
CEACAM3P40198 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.61□□□□□ -0.07
CEACAM3P40198 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CEACAM3P40198 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 AC138028.4-201ENST00000564984 1845 ntBASIC14.61□□□□□ -0.07
CEACAM3P40198 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CEACAM3P40198 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.61□□□□□ -0.07
CEACAM3P40198 AL354751.1-201ENST00000412768 1863 ntBASIC14.61□□□□□ -0.07
CEACAM3P40198 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.61□□□□□ -0.07
CEACAM3P40198 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CEACAM3P40198 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CEACAM3P40198 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CEACAM3P40198 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.6□□□□□ -0.07
CEACAM3P40198 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CEACAM3P40198 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.6□□□□□ -0.07
CEACAM3P40198 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CEACAM3P40198 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms