Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
CKS2P33552 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.21□□□□□ -0.3
CKS2P33552 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
CKS2P33552 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
CKS2P33552 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS2P33552 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CKS2P33552 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 TSPY26P-202ENST00000565928 3884 ntBASIC13.2□□□□□ -0.3
CKS2P33552 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CKS2P33552 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.2□□□□□ -0.3
CKS2P33552 PRKY-204ENST00000533551 1019 ntBASIC13.2□□□□□ -0.3
CKS2P33552 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.2□□□□□ -0.3
CKS2P33552 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 AC004264.1-201ENST00000608354 794 ntBASIC13.2□□□□□ -0.3
CKS2P33552 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.2□□□□□ -0.3
CKS2P33552 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.2□□□□□ -0.3
CKS2P33552 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.2□□□□□ -0.3
CKS2P33552 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CKS2P33552 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CKS2P33552 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CKS2P33552 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS2P33552 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CKS2P33552 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.19□□□□□ -0.3
CKS2P33552 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.19□□□□□ -0.3
CKS2P33552 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.19□□□□□ -0.3
CKS2P33552 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.19□□□□□ -0.3
CKS2P33552 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.19□□□□□ -0.3
CKS2P33552 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.19□□□□□ -0.3
CKS2P33552 MIR638-201ENST00000385237 100 ntBASIC13.19□□□□□ -0.3
CKS2P33552 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.19□□□□□ -0.3
CKS2P33552 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.19□□□□□ -0.3
CKS2P33552 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.19□□□□□ -0.3
CKS2P33552 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.19□□□□□ -0.3
CKS2P33552 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.19□□□□□ -0.3
CKS2P33552 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.19□□□□□ -0.3
CKS2P33552 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.19□□□□□ -0.3
CKS2P33552 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.19□□□□□ -0.3
CKS2P33552 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CKS2P33552 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CKS2P33552 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
CKS2P33552 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.19□□□□□ -0.3
CKS2P33552 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
CKS2P33552 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.19□□□□□ -0.3
CKS2P33552 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS2P33552 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CKS2P33552 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms