Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 LTB4R2-202ENST00000528054 3092 ntBASIC15.12■□□□□ 0.01
COL8A2P25067 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.12■□□□□ 0.01
COL8A2P25067 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
COL8A2P25067 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL8A2P25067 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
COL8A2P25067 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.12■□□□□ 0.01
COL8A2P25067 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
COL8A2P25067 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
COL8A2P25067 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.11■□□□□ 0.01
COL8A2P25067 AC125634.1-201ENST00000438758 1403 ntBASIC15.11■□□□□ 0.01
COL8A2P25067 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.11■□□□□ 0.01
COL8A2P25067 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
COL8A2P25067 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.11■□□□□ 0.01
COL8A2P25067 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.11■□□□□ 0.01
COL8A2P25067 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
COL8A2P25067 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.11■□□□□ 0.01
COL8A2P25067 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.11■□□□□ 0.01
COL8A2P25067 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.11■□□□□ 0.01
COL8A2P25067 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
COL8A2P25067 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
COL8A2P25067 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.11■□□□□ 0.01
COL8A2P25067 AL121912.1-201ENST00000603683 238 ntBASIC15.11■□□□□ 0.01
COL8A2P25067 AL138831.2-201ENST00000606564 490 ntBASIC15.11■□□□□ 0.01
COL8A2P25067 AC114341.1-201ENST00000618070 349 ntBASIC15.11■□□□□ 0.01
COL8A2P25067 REXO1L6P-202ENST00000619970 1078 ntBASIC15.11■□□□□ 0.01
COL8A2P25067 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.11■□□□□ 0.01
COL8A2P25067 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
COL8A2P25067 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.11■□□□□ 0.01
COL8A2P25067 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
COL8A2P25067 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.11■□□□□ 0.01
COL8A2P25067 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
COL8A2P25067 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.11■□□□□ 0.01
COL8A2P25067 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.11■□□□□ 0.01
COL8A2P25067 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL8A2P25067 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.1■□□□□ 0.01
COL8A2P25067 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
COL8A2P25067 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 PCDHB18P-201ENST00000524813 2368 ntBASIC15.1■□□□□ 0.01
COL8A2P25067 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.1■□□□□ 0.01
COL8A2P25067 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.1■□□□□ 0.01
COL8A2P25067 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.1■□□□□ 0.01
COL8A2P25067 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.1■□□□□ 0.01
COL8A2P25067 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.1■□□□□ 0.01
COL8A2P25067 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.1■□□□□ 0.01
COL8A2P25067 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.1■□□□□ 0.01
COL8A2P25067 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.1■□□□□ 0.01
COL8A2P25067 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.1■□□□□ 0.01
COL8A2P25067 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL8A2P25067 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms