Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DPA1P20036 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 ARMC10P1-201ENST00000313754 855 ntBASIC18.1■□□□□ 0.49
HLA-DPA1P20036 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 OR6D1P-202ENST00000641007 5290 ntBASIC18.1■□□□□ 0.49
HLA-DPA1P20036 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DPA1P20036 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 AL133373.2-201ENST00000623187 2828 ntBASIC18.09■□□□□ 0.49
HLA-DPA1P20036 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 AC087388.1-201ENST00000571370 1112 ntBASIC18.09■□□□□ 0.49
HLA-DPA1P20036 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 AC116407.2-201ENST00000613639 860 ntBASIC18.09■□□□□ 0.49
HLA-DPA1P20036 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 GNAS-203ENST00000306120 1878 ntBASIC18.09■□□□□ 0.49
HLA-DPA1P20036 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DPA1P20036 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPA1P20036 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPA1P20036 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
HLA-DPA1P20036 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPA1P20036 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPA1P20036 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPA1P20036 AC100803.2-201ENST00000562459 1963 ntBASIC18.08■□□□□ 0.49
HLA-DPA1P20036 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPA1P20036 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.08■□□□□ 0.49
HLA-DPA1P20036 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DPA1P20036 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.08■□□□□ 0.48
HLA-DPA1P20036 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms