Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL11A2P13942 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL11A2P13942 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.73■■□□□ 1.07
COL11A2P13942 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.73■■□□□ 1.07
COL11A2P13942 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.73■■□□□ 1.07
COL11A2P13942 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
COL11A2P13942 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.73■■□□□ 1.07
COL11A2P13942 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL11A2P13942 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL11A2P13942 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.73■■□□□ 1.07
COL11A2P13942 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL11A2P13942 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.73■■□□□ 1.07
COL11A2P13942 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
COL11A2P13942 AC100803.2-201ENST00000562459 1963 ntBASIC21.73■■□□□ 1.07
COL11A2P13942 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL11A2P13942 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
COL11A2P13942 COX5BP2-201ENST00000392354 334 ntBASIC21.72■■□□□ 1.07
COL11A2P13942 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.72■■□□□ 1.07
COL11A2P13942 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.72■■□□□ 1.07
COL11A2P13942 AC239800.4-201ENST00000603712 296 ntBASIC21.72■■□□□ 1.07
COL11A2P13942 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
COL11A2P13942 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.72■■□□□ 1.07
COL11A2P13942 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL11A2P13942 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.72■■□□□ 1.07
COL11A2P13942 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.72■■□□□ 1.07
COL11A2P13942 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL11A2P13942 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL11A2P13942 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
COL11A2P13942 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.72■■□□□ 1.07
COL11A2P13942 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL11A2P13942 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL11A2P13942 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.72■■□□□ 1.07
COL11A2P13942 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL11A2P13942 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.72■■□□□ 1.07
COL11A2P13942 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.72■■□□□ 1.07
COL11A2P13942 AL353135.1-201ENST00000606729 504 ntBASIC21.72■■□□□ 1.07
COL11A2P13942 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL11A2P13942 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL11A2P13942 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL11A2P13942 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.72■■□□□ 1.07
COL11A2P13942 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 AC006116.8-202ENST00000587620 1550 ntBASIC21.71■■□□□ 1.07
COL11A2P13942 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
COL11A2P13942 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
COL11A2P13942 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
COL11A2P13942 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.71■■□□□ 1.07
COL11A2P13942 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.71■■□□□ 1.07
COL11A2P13942 STK19B-204ENST00000512515 211 ntBASIC21.71■■□□□ 1.07
COL11A2P13942 AC096734.2-201ENST00000562054 433 ntBASIC21.71■■□□□ 1.07
COL11A2P13942 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.71■■□□□ 1.07
COL11A2P13942 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL11A2P13942 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.7■■□□□ 1.07
COL11A2P13942 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.7■■□□□ 1.07
COL11A2P13942 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL11A2P13942 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL11A2P13942 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.7■■□□□ 1.06
COL11A2P13942 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.7■■□□□ 1.06
COL11A2P13942 SIGLEC30P-201ENST00000455569 941 ntBASIC21.7■■□□□ 1.06
COL11A2P13942 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.7■■□□□ 1.06
COL11A2P13942 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL11A2P13942 STK25P1-201ENST00000585406 838 ntBASIC21.7■■□□□ 1.06
COL11A2P13942 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.7■■□□□ 1.06
COL11A2P13942 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL11A2P13942 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
COL11A2P13942 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL11A2P13942 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COL11A2P13942 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL11A2P13942 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.7■■□□□ 1.06
COL11A2P13942 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL11A2P13942 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL11A2P13942 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.69■■□□□ 1.06
COL11A2P13942 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.69■■□□□ 1.06
COL11A2P13942 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.69■■□□□ 1.06
COL11A2P13942 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.69■■□□□ 1.06
COL11A2P13942 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.69■■□□□ 1.06
COL11A2P13942 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.69■■□□□ 1.06
COL11A2P13942 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.69■■□□□ 1.06
COL11A2P13942 AC025580.3-201ENST00000617932 1424 ntBASIC21.69■■□□□ 1.06
COL11A2P13942 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL11A2P13942 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL11A2P13942 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.69■■□□□ 1.06
COL11A2P13942 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL11A2P13942 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL11A2P13942 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
COL11A2P13942 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL11A2P13942 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.69■■□□□ 1.06
COL11A2P13942 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.69■■□□□ 1.06
COL11A2P13942 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.69■■□□□ 1.06
COL11A2P13942 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
COL11A2P13942 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.69■■□□□ 1.06
COL11A2P13942 AC099522.2-201ENST00000607001 744 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms