Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
CYP3A4P08684 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 AF238378.1-201ENST00000526806 358 ntBASIC20.1■□□□□ 0.81
CYP3A4P08684 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 AL121894.2-201ENST00000602977 491 ntBASIC20.1■□□□□ 0.81
CYP3A4P08684 AP001269.4-201ENST00000609611 512 ntBASIC20.1■□□□□ 0.81
CYP3A4P08684 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CYP3A4P08684 AD001527.2-201ENST00000622994 785 ntBASIC20.1■□□□□ 0.81
CYP3A4P08684 AP000867.4-201ENST00000641616 219 ntBASIC20.1■□□□□ 0.81
CYP3A4P08684 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CYP3A4P08684 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.1■□□□□ 0.81
CYP3A4P08684 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.1■□□□□ 0.81
CYP3A4P08684 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CYP3A4P08684 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP3A4P08684 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CYP3A4P08684 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CYP3A4P08684 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CYP3A4P08684 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.09■□□□□ 0.81
CYP3A4P08684 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.09■□□□□ 0.81
CYP3A4P08684 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CYP3A4P08684 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CYP3A4P08684 NOC2LP1-202ENST00000452600 2235 ntBASIC20.09■□□□□ 0.81
CYP3A4P08684 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.09■□□□□ 0.81
CYP3A4P08684 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.09■□□□□ 0.81
CYP3A4P08684 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.09■□□□□ 0.81
CYP3A4P08684 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.09■□□□□ 0.81
CYP3A4P08684 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.09■□□□□ 0.81
CYP3A4P08684 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.09■□□□□ 0.81
CYP3A4P08684 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.09■□□□□ 0.81
CYP3A4P08684 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.09■□□□□ 0.81
CYP3A4P08684 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.09■□□□□ 0.81
CYP3A4P08684 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.09■□□□□ 0.81
CYP3A4P08684 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CYP3A4P08684 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.09■□□□□ 0.81
CYP3A4P08684 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 AP005117.1-201ENST00000584346 1413 ntBASIC20.09■□□□□ 0.81
CYP3A4P08684 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP3A4P08684 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.09■□□□□ 0.81
CYP3A4P08684 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.08■□□□□ 0.81
CYP3A4P08684 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CYP3A4P08684 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
CYP3A4P08684 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.08■□□□□ 0.81
CYP3A4P08684 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CYP3A4P08684 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CYP3A4P08684 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CYP3A4P08684 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.08■□□□□ 0.81
CYP3A4P08684 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CYP3A4P08684 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CYP3A4P08684 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CYP3A4P08684 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.08■□□□□ 0.81
CYP3A4P08684 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CYP3A4P08684 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CYP3A4P08684 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CYP3A4P08684 RBM17P3-201ENST00000417687 1192 ntBASIC20.08■□□□□ 0.81
CYP3A4P08684 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CYP3A4P08684 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.08■□□□□ 0.81
CYP3A4P08684 AC104692.2-201ENST00000603054 253 ntBASIC20.08■□□□□ 0.81
CYP3A4P08684 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CYP3A4P08684 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CYP3A4P08684 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.08■□□□□ 0.8
CYP3A4P08684 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
CYP3A4P08684 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CYP3A4P08684 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CYP3A4P08684 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.08■□□□□ 0.8
CYP3A4P08684 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CYP3A4P08684 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.07■□□□□ 0.8
CYP3A4P08684 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.07■□□□□ 0.8
CYP3A4P08684 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.07■□□□□ 0.8
CYP3A4P08684 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CYP3A4P08684 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.07■□□□□ 0.8
CYP3A4P08684 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms